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John Archer

John Archer

Principal Researcher

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28 Publications
Archer J, Braverman M, Taillon B, Desany B, James I, Harrigan P, Lewis M, Robertson D (2009) Detection of low-frequency pretherapy chemokine (CXC motif) receptor 4 (CXCR4)-using HIV-1 with ultra-deep pyrosequencing. AIDS, 23(10), 1209-1218. doi: 10.1097/QAD.0b013e32832b4399 Open publication
Huxley-Jones J, Pinney J, Archer J, Robertson D, Boot-Handford R (2009) Back to basics--how the evolution of the extracellular matrix underpinned vertebrate evolution. International journal of experimental pathology, 90(2), 95-100. doi: 10.1111/j.1365-2613.2008.00637.x Open publication
Simon-Loriere E, Galetto R, Hamoudi M, Archer J, Lefeuvre P, Martin D, Robertson D, Negroni M (2009) Molecular mechanisms of recombination restriction in the envelope gene of the human immunodeficiency virus. PLoS pathogens, 5(5): e1000418. doi: 10.1371/journal.ppat.1000418 Open publication
Archer J, Pinney J, Fan J, Simon-Loriere E, Arts E, Negroni M, Robertson D (2008) Identifying the important HIV-1 recombination breakpoints. PLoS computational biology, 4(9): e1000178. doi: 10.1371/journal.pcbi.1000178 Open publication
Archer J, Robertson D (2007) CTree: comparison of clusters between phylogenetic trees made easy. Bioinformatics, 23(21), 2952-2953. doi: 10.1093/bioinformatics/btm410 Open publication
Archer J, Robertson D (2007) Understanding the diversification of HIV-1 groups M and O. AIDS, 21(13), 1693-1700. doi: 10.1097/QAD.0b013e32825eabd0 Open publication
Baird H, Galetto R, Gao Y, Simon-Loriere E, Abreha M, Archer J, Fan J, Robertson D, Arts E, Negroni M (2006) Sequence determinants of breakpoint location during HIV-1 intersubtype recombination. Nucleic acids research, 34(18): 5203-5216. doi: 10.1093/nar/gkl669 Open publication
Taylor M, Bilo K, Cross H, Archer J, Underwood A (1999) 16S rDNA phylogeny and ultrastructural characterization of Wolbachia intracellular bacteria of the filarial nematodes Brugia malayi, B. pahangi, and Wuchereria bancrofti. Experimental parasitology, 91(4),:356-361. doi: 10.1006/expr.1998.4383 Open publication
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