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José Melo-Ferreira

Principal Researcher

Publications

68 Publications

Lado, S., Elbers, J. P., Rogers, M. F., Melo-Ferreira, J., Yadamsuren, A., Corander, J., Horin, P., & Burger, P. A. (2020). Nucleotide diversity of functionally different groups of immune response genes in Old World camels based on newly annotated and reference-guided assemblies. Bmc Genomics, 21(1), 606. doi: 10.1186/s12864-020-06990-4 Open publication

Marques, J. P., Seixas, F. A., Farelo, L., Callahan, C. M., Good, J. M., Montgomery, W. I., … Melo-Ferreira, J. (2020). An Annotated Draft Genome of the Mountain Hare (Lepus timidus). Genome Biology and Evolution, 12(1), 3656–3662. doi: 10.1093/gbe/evz273 Open publication

Giska, I., Farelo, L., Pimenta, J., Seixas, F. A., Ferreira, M. S., Marques, J. P., … Melo-Ferreira, J. (2019). Introgression drives repeated evolution of winter coat color polymorphism in hares. Proceedings of the National Academy of Sciences. doi: 10.1073/pnas.1910471116 Open publication

Lado S, Alves PC, Islam MZ, Brito JC, Melo-Ferreira J (2019). The evolutionary history of the Cape hare (Lepus capensis sensu lato): insights for systematics and biogeography. Heredity, 123: 634-646 doi: 10.1038/s41437-019-0229-8 Open publication

Pinheiro, A., Águeda-Pinto, A., Melo-Ferreira, J., Neves, F., Abrantes, J., & Esteves, P. J. (2019). Analysis of substitution rates showed that TLR5 is evolving at different rates among mammalian groups. BMC evolutionary biology, 19(1), 221. doi: 10.1186/s12862-019-1547-4 Open publication

Jones MR, Mills LS, Alves PC, Callahan CM, Alves JM, Lafferty DJR, Jiggins FM, Jensen JD, Melo-Ferreira J, Good JM (2018) Adaptive introgression underlies polymorphic seasonal camouflage in snowshoe hares. Science, 360(6395): 1355-1358. doi: 10.1126/science.aar5273 Open publication

Lado S, Farelo L, Forest V, Acevedo P, Dalén L, Melo‐Ferreira J (2018) Post‐glacial range revolutions in South European hares (Lepus spp.): Insights from ancient DNA and ecological niche modelling. Journal of Biogeography 45, 2609-2618. doi: 10.1111/jbi.13454 Open publication

Mills LS, Bragina EV, Kumar AV, Zimova M, Lafferty DJR, Feltner J, Davis BM, Hacklander K, Alves PC, Good JM, Melo-Ferreira J, Dietz A, Abramov AV, Lopatina N, Fay K (2018) Winter color polymorphisms identify global hot spots for evolutionary rescue from climate change. Science, 359(6379): 1033-1036. doi: 10.1126/science.aan8097 Open publication

Seixas FA, Boursot P, Melo-Ferreira J (2018) The genomic impact of historical hybridization with massive mitochondrial DNA introgression. Genome Biology, 19: 91. doi: 10.1186/s13059-018-1471-8 Open publication

Silverio D, Lopes AM, Melo-Ferreira J, Magalhaes MJ, Monterroso P, Serronha A, Maio E, Alves PC, Esteves PJ, Abrantes J (2018) Insights into the evolution of the new variant rabbit haemorrhagic disease virus (GI.2) and the identification of novel recombinant strains. Transboundary and Emerging Diseases, 65(4): 983-992. doi: 10.1111/tbed.12830 Open publication

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