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José Melo-Ferreira

José Melo-Ferreira

Principal Researcher

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68 Publications
Melo-Ferreira J, Seixas F, Cheng E, Mills LS, Alves PC (2013) Cryptic Divergence and ancestral hybridization among North American hares (Lepus spp.). The 11th International Mammalogical Congress, Belfast, Northern Ireland, 11-16 August 2013.Oral
Seixas F, Juste J, Campos PF, Carneiro M, Ferrand N, Alves PC, Melo-Ferreira J (2014) Colonization history of Majorca Island by the European rabbit (Oryctolagus cuniculus) and the Iberian hare (Lepus granatensis) inferred from molecular variation. Biological Journal of the Linnean Society, 111(4): 748-760. doi: 10.1111/bij.12248 Open publication
Acevedo P, Jiménez-Valverde A, Melo-Ferreira J, Real R, Alves PC (2012) Parapatric species and the implications for climate change studies: a case study on hares in Europe. Global Change Biology, 18: 1509-1519. doi: 10.1111/j.1365-2486.2012.02655.x Open publication
Acevedo P, Melo-Ferreira J, Real R, Alves PC (2012) Past, Present and Future Distributions of an Iberian Endemic, Lepus granatensis: Ecological and Evolutionary Clues from Species Distribution Models. PLoS One, 7(12): e51529. doi: 10.1371/journal.pone.0051529 Open publication
Cahais V, Gayral P, Tsagkogeorga G, Melo-Ferreira J, Ballenghien M, Weinert L, Chiari Y, et al. (2012) Reference-free transcriptome assembly in non-model animals from next generation sequencing data. Molecular Ecology Resources, 12(5): 834-845. doi: 10.1111/j.1755-0998.2012.03148.x Open publication
Carneiro M, Albert FW, Melo-Ferreira J, Galtier N, Gayral P, Blanco-Aguiar JA, Villafuerte R, Nachman MW, Ferrand N (2012) Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome. Molecular Biology and Evolution, 29(7): 1837-1849. doi: 10.1093/molbev/mss025 Open publication
Melo-Ferreira J, Boursot P, Carneiro M, Esteves PJ, Farelo L, Alves PC (2012) Recurrent Introgression of Mitochondrial DNA Among Hares (Lepus spp.) revealed by Species-tree Inference and Coalescent Simulations. Systematic Biology, 61(3): 367-381. doi: 10.1093/sysbio/syr114 Open publication
Paupério J, Herman JS, Melo-Ferreira J, Jaarola M, Alves PC, Searle JB (2012) Cryptic speciation in the field vole: A multilocus approach confirms three highly divergent lineages in Eurasia. Molecular Ecology, 21(24): 6015-6032. doi: 10.1111/mec.12024 Open publication
Boratynski Z, Alves PC, Berto S, Koskela E, Mappes T, Melo-Ferreira J (2011) Introgression of mitochondrial DNA among Myodes voles: consequences for energetics? BMC Evolutionary Biology, 11: 355. doi: 10.1186/1471-2148-11-355 Open publication
Melo-Ferreira J, Alves PC, Rocha J, Ferrand N, Boursot P (2011) Interspecific X-chromosome and mitochondrial DNA introgression in the Iberian hare: selection or allele surfing? Evolution, 65(7): 1956-1968. doi: 10.1111/j.1558-5646.2011.01261.x Open publication
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