Paulo Célio Alves

Associate Professor

Publications

190 Publications

Mathias, M. L., Fonseca, C., Rodrigues, L., Grilo C., Lopes-Fernandes, M., Palmeirim, J.M., Santos-Reis, M., Alves, P.C., Cabral, J.A., Ferreira, M., Mira, A., Eira, C., Negrões, N., Paupério, J., Pita, R., Rainho, A., Rosalino, L.M., Tapisso, J.M., Vingada, J.(Eds.). (2023). Livro Vermelho dos Mamíferos de Portugal Continental. FCiências.ID, ICNF.

Abade dos Santos, F.A., Santos, N., Carvalho, C.L., Martinez-Haro, M., Gortázar, C., García-Bocanegra, I., Capucci, L., Duarte, M., Célio Alves, P. (2022). Retrospective serological and molecular survey of myxoma or antigenically-related virus in the Iberian hare, Lepus granatensis. Transboundary and Emerging Diseases, 69, 3637– 3650. doi: https://doi.org/10.1111/tbed.14734 Open publication

Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J., Waldvogel, A.-M., Zhang, G., Mazzoni, C. J., Jarvis, E. D., Bálint, M., Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Čiampor, F., Ciofi, C., Crottini, A., Godoy, J. A., Hoglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J., Waldvogel, A.-M., Zhang, G., Mazzoni, C. J., Jarvis, E., Bálint, M., Aghayan, S. A., Alioto, T. S., Almudi, I., Alvarez, N., Alves, P. C., Amorim, I. R., Antunes, A., Arribas, P., Baldrian, P., Berg, P. R., Bertorelle, G., Böhne, A., Bonisoli-Alquati, A., Boštjančić, L. L., Boussau, B., Breton, C. M., Buzan, E., Campos, P. F., Carreras, C., Castro, L. F., Chueca, L. J., Conti, E., Cook-Deegan, R., Croll, D., Cunha, M. V., Delsuc, F., Dennis, A. B., Dimitrov, D., Faria, R., Favre, A., Fedrigo, O. D., Fernández, R., Ficetola, G. F., Flot, J.-F., Gabaldón, T., Galea Agius, D. R., Gallo, G. R., Giani, A. M., Gilbert, M. T. P., Grebenc, T., Guschanski, K., Guyot, R., Hausdorf, B., Hawlitschek, O., Heintzman, P. D., Heinze, B., Hiller, M., Husemann, M., Iannucci, A., Irisarri, I., Jakobsen, K. S., Jentoft, S., Klinga, P., Kloch, A., Kratochwil, C. F., Kusche, H., Layton, K. K. S., Leonard, J. A., Lerat, E., Liti, G., Manousaki, T., Marques-Bonet, T., Matos-Maraví, P., Matschiner, M., Maumus, F., Mc Cartney, A. M., Meiri, S., Melo-Ferreira, J., Mengual, X., Monaghan, M. T., Montagna, M., Mysłajek, R. W., Neiber, M. T., Nicolas, V., Novo, M., Ozretić, P., Palero, F., Pârvulescu, L., Pascual, M., Paulo, O. S., Pavlek, M., Pegueroles, C., Pellissier, L., Pesole, G., Primmer, C. R., Riesgo, A., Rüber, L., Rubolini, D., Salvi, D., Seehausen, O., Seidel, M., Secomandi, S., Studer, B., Theodoridis, S., Thines, M., Urban, L., Vasemägi, A., Vella, A., Vella, N., Vernes, S. C., Vernesi, C., Vieites, D. R., Waterhouse, R. M., Wheat, C. W., Wörheide, G., Wurm, Y., & Zammit, G. (2022). The era of reference genomes in conservation genomics. Trends in Ecology & Evolution, 37(3), 197-202. doi: 10.1016/j.tree.2021.11.008 Open publication

Giska, I., Pimenta, J., Farelo, L., Boursot, P., Hackländer, K., Jenny, H., Reid, N., Montgomery, W. I., Prodöhl, P. A., Alves, P. C., & Melo-Ferreira, J. (2022). The evolutionary pathways for local adaptation in mountain hares. Molecular Ecology, 31(5), 1487-1503. doi: 10.1111/mec.16338 Open publication

Pacheco, H., Lopes, A.L., Bárcena, J., Blanco, E., Abrantes, J., Esteves, P., Choquet, R., Alves, P.C., Santos, N. (2022). Multi‐event capture‐recapture models estimate the diagnostic performance of serological tests for myxoma and rabbit haemorrhagic disease viruses in the absence of reference samples. Transboundary and Emerging Diseases, 69, e3024–e3035. doi: https://doi.org/10.1111/tbed.14657 Open publication

Santos, N., Ferreras Colino, E., Arnal, M.C., Fernández de Luco, D., Sevilla, I., Garrido, J.M., Fonseca, E., Valente, A.M., Balseiro A, Queirós J, Almeida V, Vicente J, Gortázar C, Alves PC (2022). Complementary roles of wild boar and red deer to animal tuberculosis maintenance in multi-host communities. Epidemics, 41: 100633. doi: https://doi.org/10.1016/j.epidem.2022.100633 Open publication

Alves, P.C., Santos, N. (2021). Sex and age-specific hematology and biochemistry reference intervals of live Iberian hares Lepus granatensis and comparison with post-mortem sampling. Journal of Wildlife Diseases, 57(1), 2021. 178–183. doi: https://doi.org/10.7589/JWD-D-19-00010 Open publication

Carpio, A. J., Melo-Ferreira, J., Martinez-Haro, M., Farelo, L., Campos, R., Alves, P. C., & Acevedo, P. (2021). Iberian hares with anciently introgressed mitochondrial DNA express a marginal environmental niche. Journal of Biogeography, 48(9), 2328-2336. doi: 10.1111/jbi.14155 Open publication

Filipa M.S. Martins, Maria J. Feio, Miguel Porto, Ana F. Filipe, Aurélie Bonin, Sónia R.Q. Serra, Paulo C. Alves, Pierre Taberlet, Pedro Beja (2021). Assessing changes in stream macroinvertebrate communities across ecological gradients using morphological versus DNA metabarcoding approaches. Science of The Total Environment, 797, 149030. doi: 10.1016/j.scitotenv.2021.149030 Open publication

Ferreira, M. S., Alves, P. C., Callahan, C. M., Giska, I., Farelo, L., Jenny, H., Mills, L. S., Hackländer, K., Good, J. M., & Melo-Ferreira, J. (2020). Transcriptomic regulation of seasonal coat color change in hares. Ecology and Evolution, 10(3), 1180-1192. doi: 10.1002/ece3.5956 Open publication