Rui Faria

Research Associate

Publications

49 Publications

Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Ciofi, C., Crottini, A., Godoy, J. A., Höglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P. J., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J., Waldvogel, A.-M., Zhang, G., Mazzoni, C. J., Jarvis, E. D., Bálint, M., Formenti, G., Theissinger, K., Fernandes, C., Bista, I., Bombarely, A., Bleidorn, C., Čiampor, F., Ciofi, C., Crottini, A., Godoy, J. A., Hoglund, J., Malukiewicz, J., Mouton, A., Oomen, R. A., Paez, S., Palsbøll, P., Pampoulie, C., Ruiz-López, M. J., Svardal, H., Theofanopoulou, C., de Vries, J., Waldvogel, A.-M., Zhang, G., Mazzoni, C. J., Jarvis, E., Bálint, M., Aghayan, S. A., Alioto, T. S., Almudi, I., Alvarez, N., Alves, P. C., Amorim, I. R., Antunes, A., Arribas, P., Baldrian, P., Berg, P. R., Bertorelle, G., Böhne, A., Bonisoli-Alquati, A., Boštjančić, L. L., Boussau, B., Breton, C. M., Buzan, E., Campos, P. F., Carreras, C., Castro, L. F., Chueca, L. J., Conti, E., Cook-Deegan, R., Croll, D., Cunha, M. V., Delsuc, F., Dennis, A. B., Dimitrov, D., Faria, R., Favre, A., Fedrigo, O. D., Fernández, R., Ficetola, G. F., Flot, J.-F., Gabaldón, T., Galea Agius, D. R., Gallo, G. R., Giani, A. M., Gilbert, M. T. P., Grebenc, T., Guschanski, K., Guyot, R., Hausdorf, B., Hawlitschek, O., Heintzman, P. D., Heinze, B., Hiller, M., Husemann, M., Iannucci, A., Irisarri, I., Jakobsen, K. S., Jentoft, S., Klinga, P., Kloch, A., Kratochwil, C. F., Kusche, H., Layton, K. K. S., Leonard, J. A., Lerat, E., Liti, G., Manousaki, T., Marques-Bonet, T., Matos-Maraví, P., Matschiner, M., Maumus, F., Mc Cartney, A. M., Meiri, S., Melo-Ferreira, J., Mengual, X., Monaghan, M. T., Montagna, M., Mysłajek, R. W., Neiber, M. T., Nicolas, V., Novo, M., Ozretić, P., Palero, F., Pârvulescu, L., Pascual, M., Paulo, O. S., Pavlek, M., Pegueroles, C., Pellissier, L., Pesole, G., Primmer, C. R., Riesgo, A., Rüber, L., Rubolini, D., Salvi, D., Seehausen, O., Seidel, M., Secomandi, S., Studer, B., Theodoridis, S., Thines, M., Urban, L., Vasemägi, A., Vella, A., Vella, N., Vernes, S. C., Vernesi, C., Vieites, D. R., Waterhouse, R. M., Wheat, C. W., Wörheide, G., Wurm, Y., & Zammit, G. (2022). The era of reference genomes in conservation genomics. Trends in Ecology & Evolution, 37(3), 197-202. doi: 10.1016/j.tree.2021.11.008 Open publication

E.L. Koch, H. Morales, J. Larsson, A.M. Westram, R. Faria, A.R. Lemmon, E.M. Lemmon, K. Johannesson, R.K. Butlin. Genetic variation for adaptive traits is associated with polymorphic inversions in Littorina saxatilis. Evolution Letters 5, 196-213 doi: 10.1002/evl3.227 Open publication

Faria R, Johannesson, J, Stankowski S. (2021) Speciation in marine environments: diving under the surface. Journal of Evolutionary Biology 4-15. doi: 10.1111/jeb.13756 Open publication

Galindo J, Carvalho J, Sotelo G, Duvetorp M, Costa D, Kemppainen K, Panova M, Kaliontzopoulou A, Johannesson K, Faria R. (2021) Genetic and morphological divergence between Littorina fabalis ecotypes in Northern Europe. Journal of Evolutionary Biology 34, 97-113. doi: 10.1111/jeb.13705 Open publication

M. Rafajlovic, J. Rambla, J. Feder, A. Navarro, R. Faria. Assessing the role of inversions in maintaining genomic differentiation after secondary contact: local adaptation, genetic incompatibilities, and drift. Evolution 75, 1288-1303. doi: 10.1101/2020.08.25.267369 Open publication

Westram AM, Faria R, Butlin RK, Johannesson K. Using replicate hybrid zones to understand the genomic basis of adaptive divergence. Molecular Ecology. https://doi.org/10.1111/mec.15861 doi: 10.1111/mec.15861 Open publication

Costa D, Sotelo G, Kaliontzopoulou A, Carvalho J, Butlin R, Hollander J, Faria R (2020). Hybridization patterns between two marine snails, Littorina fabalis and L. obtusata. Ecology and evolution, 10(3): 1158-1179. doi: 10.1002/ece3.5943 Open publication

Estévez D, Kozminsky E, Carvajal-Rodríguez A. Caballero A, Faria R, Galindo J & Rolán-Alvarez E. (2020) Frequency-dependent sexual selection contributes to the maintenance of shell colour polymorphism in a marine snail by means of mate choice. Frontiers in Marine Science 7:614237. doi: 10.3389/fmars.2020.614237 Open publication

Galindo J, Carvalho J, Sotelo G, Duvetorp M, Costa D, Kemppainen P, Panova M, Kaliontzopoulou A, Johannesson K, Faria R (2020). Genetic and morphological divergence between Littorina fabalis ecotypes in Northern Europe. Journal of Evolutionary Biology 34, 97-113. doi: 10.1111/jeb.13705 Open publication

Johannesson K, Zagrodzka Z, Faria R, Marie Westram A, Butlin RK (2020). Is embryo abortion a post-zygotic barrier to gene flow between Littorina ecotypes? Journal of evolutionary biology, 33(3): 342-351. doi: 10.1111/jeb.13570 Open publication